Modularization of the RodCellJ-package. 2D and 3D static and dynamic images can be analyzed with the software. The core modules of the software are the protein detection-, the DP- and the Rodscule-modules. Quantitative cell and protein related parameters can be calculated and saved. In the case of dynamic images kymographs can be established. The plugin for cell segmentation implementing the Rodscule is also separately available.